STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY51541.1Hypothetical protein. (443 aa)    
Predicted Functional Partners:
SDY51636.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.997
SDY51573.1
Hypothetical protein.
     0.954
SDY57916.1
Methionyl-tRNA formyltransferase.
  
 
 0.845
SDY51729.1
Surfactin synthase thioesterase subunit.
  
 
 0.732
SDY37496.1
Medium-chain acyl-[acyl-carrier-protein] hydrolase.
  
 
 0.670
hflX
GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.
       0.523
SDY51468.1
Tetratricopeptide repeat-containing protein.
 
     0.491
SDY51668.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.453
SDY51604.1
Phosphorylcholine metabolism protein LicD.
       0.430
SDY54228.1
Acetyl esterase/lipase.
  
 
  0.428
Your Current Organism:
Lachnobacterium bovis
NCBI taxonomy Id: 1122142
Other names: L. bovis DSM 14045, Lachnobacterium bovis DSM 14045
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.