STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY71089.1Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (483 aa)    
Predicted Functional Partners:
SDY71106.1
Flagellar protein FliS.
  
 
 0.976
SDY02118.1
Flagellar protein FliS.
 
 
 0.970
SDX83577.1
Flagellar motor switch protein FliN/FliY.
 
 
 0.958
SDX83057.1
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
 
 0.954
SDX83086.1
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
 
  
 0.937
SDX83425.1
Flagellar hook protein FlgE.
 
  
 0.937
fliW
Flagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.
 
 
 0.937
SDX83184.1
Flagellar motor switch protein FliG.
 
  
 0.929
SDX83246.1
Flagellum-specific ATP synthase.
 
 
 0.921
SDY13005.1
Flagellar basal-body rod protein FlgG.
 
 
 0.921
Your Current Organism:
Lachnobacterium bovis
NCBI taxonomy Id: 1122142
Other names: L. bovis DSM 14045, Lachnobacterium bovis DSM 14045
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.