STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000425865_00237Unannotated protein. (159 aa)    
Predicted Functional Partners:
GCA_000425865_00236
Unannotated protein.
  
  
 0.862
GCA_000425865_00235
Unannotated protein.
       0.757
GCA_000425865_00019
Unannotated protein.
      0.740
GCA_000425865_00240
Unannotated protein.
     
 0.711
GCA_000425865_00238
Unannotated protein.
  
    0.607
GCA_000425865_00239
Unannotated protein.
  
    0.601
GCA_000425865_00241
Unannotated protein.
     
 0.549
GCA_000425865_00098
Unannotated protein.
      
 0.515
GCA_000425865_00231
Unannotated protein.
     
 0.487
GCA_000425865_00663
Unannotated protein.
      
 0.487
Your Current Organism:
Lacticigenium naphtae
NCBI taxonomy Id: 1122143
Other names: L. naphtae DSM 19658, Lacticigenium naphtae DSM 19658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.