STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000425865_00824Unannotated protein. (238 aa)    
Predicted Functional Partners:
GCA_000425865_01260
Unannotated protein.
  
 
 0.956
GCA_000425865_00375
Unannotated protein.
  
 
 0.844
GCA_000425865_00586
Unannotated protein.
     
 0.822
GCA_000425865_00361
Unannotated protein.
  
 
 0.812
GCA_000425865_00841
Unannotated protein.
    
 0.790
GCA_000425865_01098
Unannotated protein.
    
  0.777
GCA_000425865_00823
Unannotated protein.
 
     0.752
GCA_000425865_01536
Unannotated protein.
   
 
 0.746
GCA_000425865_00821
Unannotated protein.
 
     0.624
GCA_000425865_00822
Unannotated protein.
       0.561
Your Current Organism:
Lacticigenium naphtae
NCBI taxonomy Id: 1122143
Other names: L. naphtae DSM 19658, Lacticigenium naphtae DSM 19658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.