STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000425865_01227Unannotated protein. (497 aa)    
Predicted Functional Partners:
GCA_000425865_00823
Unannotated protein.
  
     0.544
GCA_000425865_00031
Unannotated protein.
    
  0.493
GCA_000425865_00315
Unannotated protein.
  
     0.477
GCA_000425865_00664
Unannotated protein.
  
     0.462
GCA_000425865_00943
Unannotated protein.
 
     0.453
GCA_000425865_01061
Unannotated protein.
  
     0.438
GCA_000425865_01229
Unannotated protein.
       0.415
GCA_000425865_01803
Unannotated protein.
   
    0.412
GCA_000425865_01308
Unannotated protein.
  
     0.406
GCA_000425865_01226
Unannotated protein.
       0.404
Your Current Organism:
Lacticigenium naphtae
NCBI taxonomy Id: 1122143
Other names: L. naphtae DSM 19658, Lacticigenium naphtae DSM 19658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.