STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ackAAcetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (399 aa)    
Predicted Functional Partners:
KRN90001.1
Pta protein.
 
 0.997
KRN89534.1
Acetolactate synthase; Belongs to the TPP enzyme family.
    
 0.949
KRN88409.1
Phosphoketolase.
 
  
 0.890
KRN89134.1
Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 
 0.680
KRN89386.1
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
  
 
 0.659
KRN88944.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 
 0.649
KRN88927.1
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
   
 
 0.644
KRN89971.1
Catabolite control protein a.
    
 
 0.631
fni
Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
     
 0.608
KRN89250.1
Transcriptional regulator.
    
 
 0.577
Your Current Organism:
Lactobacillus ceti
NCBI taxonomy Id: 1122146
Other names: L. ceti DSM 22408, Lactobacillus ceti 142-2, Lactobacillus ceti DSM 22408
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