STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN88646.1Hypothetical protein. (333 aa)    
Predicted Functional Partners:
KRN88645.1
Hypothetical protein.
 
     0.959
KRN88647.1
Hypothetical protein.
 
     0.948
KRN88495.1
Hypothetical protein.
  
     0.769
KRN89813.1
Hypothetical protein.
  
     0.769
KRN90374.1
Hypothetical protein.
  
     0.768
KRN89804.1
Hypothetical protein.
  
     0.762
KRN88834.1
Hypothetical protein.
  
     0.761
KRN90361.1
Membrane protein.
  
     0.735
KRN89421.1
Hypothetical protein.
  
     0.733
KRN88357.1
Hypothetical protein.
  
     0.728
Your Current Organism:
Lactobacillus ceti
NCBI taxonomy Id: 1122146
Other names: L. ceti DSM 22408, Lactobacillus ceti 142-2, Lactobacillus ceti DSM 22408
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.