KRN88987.1 protein (Lactobacillus ceti) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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Experiments

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[Homology]

Score

KRN88987.1

Universal stress protein UspA. (169 aa)

Predicted Functional Partners:

KRN90566.1

0.653

KRN89983.1

0.639

KRN88986.1

0.455

Your Current Organism:

Lactobacillus ceti

NCBI taxonomy Id: 1122146
Other names: L. ceti DSM 22408, Lactobacillus ceti 142-2, Lactobacillus ceti DSM 22408

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KRN88986.1	KRN88987.1	IV53_GL000958	IV53_GL000959	Recombination factor protein RarA.	Universal stress protein UspA.	0.455
KRN88987.1	KRN88986.1	IV53_GL000959	IV53_GL000958	Universal stress protein UspA.	Recombination factor protein RarA.	0.455
KRN88987.1	KRN89983.1	IV53_GL000959	IV53_GL001101	Universal stress protein UspA.	Universal stress protein.	0.639
KRN88987.1	KRN90566.1	IV53_GL000959	IV53_GL000208	Universal stress protein UspA.	Universal stress protein.	0.653
KRN89983.1	KRN88987.1	IV53_GL001101	IV53_GL000959	Universal stress protein.	Universal stress protein UspA.	0.639
KRN90566.1	KRN88987.1	IV53_GL000208	IV53_GL000959	Universal stress protein.	Universal stress protein UspA.	0.653