STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN89983.1Universal stress protein. (160 aa)    
Predicted Functional Partners:
KRN89984.1
Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
       0.774
KRN88771.1
SGNH superfamily hydrolase.
  
     0.661
KRN88772.1
Hypothetical protein.
  
     0.640
KRN88987.1
Universal stress protein UspA.
  
   
 0.639
KRN89993.1
Hypothetical protein.
 
     0.599
KRN90556.1
Hypothetical protein.
  
    0.564
KRN88895.1
RibT protein.
  
     0.562
KRN89985.1
Hypothetical protein.
       0.528
KRN88496.1
Universal stress protein.
  
   
 0.475
KRN88887.1
Hypothetical protein.
 
    0.426
Your Current Organism:
Lactobacillus ceti
NCBI taxonomy Id: 1122146
Other names: L. ceti DSM 22408, Lactobacillus ceti 142-2, Lactobacillus ceti DSM 22408
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.