STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM59111.1Hypothetical protein. (345 aa)    
Predicted Functional Partners:
KRM59112.1
Hypothetical protein.
 
    0.919
KRM58771.1
Haloacid dehalogenase.
  
     0.715
KRM58543.1
Bleomycin resistance protein.
    
 0.688
KRM58544.1
Ring-cleaving dioxygenase MhqA.
    
 0.688
KRM58545.1
Glyoxalase bleomycin resistance protein dioxygenase.
    
 0.688
KRM58609.1
Hypothetical protein.
  
     0.632
KRM56689.1
Regulatory protein TetR.
  
     0.573
KRM59110.1
Hypothetical protein.
       0.551
KRM57705.1
Hypothetical protein.
  
     0.448
KRM59109.1
Hypothetical protein.
       0.424
Your Current Organism:
Lactobacillus malefermentans
NCBI taxonomy Id: 1122149
Other names: L. malefermentans DSM 5705 = KCTC 3548, Lactobacillus malefermentans DSM 5705, Lactobacillus malefermentans DSM 5705 = KCTC 3548, Lactobacillus malefermentans KCTC 3548, Lactobacillus malefermentans KCTC 3548 = DSM 5705
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.