STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM58739.1Hypothetical protein. (104 aa)    
Predicted Functional Partners:
KRM59358.1
Hypothetical protein.
  
     0.749
KRM57956.1
Hypothetical protein.
  
     0.747
KRM58641.1
Hypothetical protein.
  
     0.739
KRM58801.1
Hypothetical protein.
  
     0.734
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
       0.723
KRM58476.1
Hypothetical protein.
  
     0.719
KRM58981.1
Hypothetical protein.
  
     0.711
KRM57225.1
Hypothetical protein.
  
     0.700
KRM55213.1
Hypothetical protein.
  
     0.699
KRM58479.1
Hypothetical protein.
  
     0.698
Your Current Organism:
Lactobacillus malefermentans
NCBI taxonomy Id: 1122149
Other names: L. malefermentans DSM 5705 = KCTC 3548, Lactobacillus malefermentans DSM 5705, Lactobacillus malefermentans DSM 5705 = KCTC 3548, Lactobacillus malefermentans KCTC 3548, Lactobacillus malefermentans KCTC 3548 = DSM 5705
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.