STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM58634.1ABC-type nitrate sulfonate bicarbonate transporter. (324 aa)    
Predicted Functional Partners:
KRM58630.1
ABC transporter permease.
 
 0.998
KRM58631.1
ABC-type nitrate sulfonate bicarbonate transport system, ATPase component.
 
 0.993
KRM58632.1
Acyltransferase.
 
     0.936
KRM58633.1
acyl-CoA synthetase family protein.
 
    0.936
KRM58719.1
Fumarate reductase, flavoprotein subunit precursor.
  
 
 0.587
KRM58071.1
Flavin oxidoreductase.
  
 
 0.587
KRM59542.1
Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase-like protein.
  
 
 0.576
KRM55614.1
MobC-like protein.
  
 
 0.576
KRM57314.1
Flavoprotein.
  
 
  0.550
KRM58547.1
Hypothetical protein.
  
 
  0.543
Your Current Organism:
Lactobacillus malefermentans
NCBI taxonomy Id: 1122149
Other names: L. malefermentans DSM 5705 = KCTC 3548, Lactobacillus malefermentans DSM 5705, Lactobacillus malefermentans DSM 5705 = KCTC 3548, Lactobacillus malefermentans KCTC 3548, Lactobacillus malefermentans KCTC 3548 = DSM 5705
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