STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM57567.1Spermidine putrescine ABC transporter permease. (278 aa)    
Predicted Functional Partners:
KRM57565.1
Spermidine putrescine-binding periplasmic protein.
 
 0.999
KRM57566.1
Spermidine putrescine ABC transporter permease.
 
 0.999
potA
Spermidine putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 0.999
KRM58029.1
Sugar ABC transporterATPase.
  
 0.708
KRM57564.1
Hypothetical protein.
       0.554
KRM57196.1
Hypothetical protein.
    
  0.521
KRM56184.1
Exonuclease SbcC.
    
  0.521
KRM58031.1
Sugar ABC transporterpermease.
   
 
  0.519
KRM57569.1
Hypothetical protein.
       0.497
KRM58631.1
ABC-type nitrate sulfonate bicarbonate transport system, ATPase component.
   
  0.487
Your Current Organism:
Lactobacillus malefermentans
NCBI taxonomy Id: 1122149
Other names: L. malefermentans DSM 5705 = KCTC 3548, Lactobacillus malefermentans DSM 5705, Lactobacillus malefermentans DSM 5705 = KCTC 3548, Lactobacillus malefermentans KCTC 3548, Lactobacillus malefermentans KCTC 3548 = DSM 5705
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.