STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM57548.1Hypothetical protein. (169 aa)    
Predicted Functional Partners:
KRM57547.1
Diguanylate cyclase phosphodiesterase domain-containing protein.
    0.989
KRM57549.1
Glycosyltransferase.
 
    0.952
KRM57550.1
C-di-GMP-specific phosphodiesterase.
 
    0.694
KRM57546.1
Malate dehydrogenase.
       0.475
KRM57551.1
NADH oxidase.
       0.475
KRM57136.1
C-di-GMP-specific phosphodiesterase.
 
    0.471
KRM58606.1
MarR family transcriptional regulator.
  
     0.463
KRM57552.1
Hypothetical protein.
       0.421
KRM57553.1
Signal transduction diguanylate cyclase.
       0.421
Your Current Organism:
Lactobacillus malefermentans
NCBI taxonomy Id: 1122149
Other names: L. malefermentans DSM 5705 = KCTC 3548, Lactobacillus malefermentans DSM 5705, Lactobacillus malefermentans DSM 5705 = KCTC 3548, Lactobacillus malefermentans KCTC 3548, Lactobacillus malefermentans KCTC 3548 = DSM 5705
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.