STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM56750.1Transcriptional regulator. (96 aa)    
Predicted Functional Partners:
KRM59661.1
nagE protein.
   
 
 0.824
KRM59662.1
N-acetylglucosamine and glucose PTS, EIICBA.
   
 
 0.824
KRM56751.1
Efflux pump antibiotic resistance protein.
       0.773
KRM58116.1
Transcriptional regulator.
  
     0.644
KRM58770.1
Transcriptional regulator.
  
     0.616
KRM58571.1
Transcriptional regulator.
  
     0.556
KRM57327.1
Hypothetical protein.
  
     0.524
KRM56752.1
Hypothetical protein.
       0.467
KRM58774.1
Multidrug resistance protein.
  
     0.448
KRM56753.1
Hypothetical protein.
       0.447
Your Current Organism:
Lactobacillus malefermentans
NCBI taxonomy Id: 1122149
Other names: L. malefermentans DSM 5705 = KCTC 3548, Lactobacillus malefermentans DSM 5705, Lactobacillus malefermentans DSM 5705 = KCTC 3548, Lactobacillus malefermentans KCTC 3548, Lactobacillus malefermentans KCTC 3548 = DSM 5705
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.