STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM59296.1HAD superfamily hydrolase. (274 aa)    
Predicted Functional Partners:
KRM57582.1
HAD superfamily hydrolase.
  
 
  0.804
KRM57704.1
Cof family hydrolase.
 
 
  0.751
KRM55671.1
Cof family hydrolase.
 
 
  0.738
KRM59295.1
tRNA and rRNA cytosine-C5-methylase.
       0.601
KRM57583.1
HAD superfamily hydrolase.
  
 
 
0.517
KRM58963.1
HAD superfamily hydrolase.
  
 
 
0.511
KRM59390.1
FAD synthase; Belongs to the ribF family.
    
 0.421
Your Current Organism:
Lactobacillus malefermentans
NCBI taxonomy Id: 1122149
Other names: L. malefermentans DSM 5705 = KCTC 3548, Lactobacillus malefermentans DSM 5705, Lactobacillus malefermentans DSM 5705 = KCTC 3548, Lactobacillus malefermentans KCTC 3548, Lactobacillus malefermentans KCTC 3548 = DSM 5705
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.