STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL39922.1Hypothetical protein. (153 aa)    
Predicted Functional Partners:
KRL39921.1
Hypothetical protein.
       0.772
KRL39923.1
Prophage protein.
       0.581
KRL39920.1
Prophage protein.
       0.530
KRL39919.1
Prophage protein.
       0.529
KRL39918.1
Hypothetical protein.
       0.528
KRL39916.1
Prophage major head protein.
       0.470
KRL39917.1
Hypothetical protein.
       0.460
KRL39915.1
Prophage protein.
       0.447
KRL39914.1
Scaffold protein.
       0.426
KRL39924.1
Hypothetical protein.
       0.420
Your Current Organism:
Lactobacillus nagelii
NCBI taxonomy Id: 1122150
Other names: L. nagelii DSM 13675, Lactobacillus nagelii DSM 13675
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.