STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL41873.1Na+ xyloside symporter related transporter. (516 aa)    
Predicted Functional Partners:
KRL41858.1
Na-galactoside symporter.
  
     0.756
uxaC
Glucuronate isomerase.
 
   
 0.578
KRL41855.1
Mannitol dehydrogenase.
 
   
 0.526
KRL41867.1
Hypothetical protein.
  
     0.516
uxaC-2
Glucuronate isomerase.
 
   
 0.489
KRL40135.1
PTS system beta-glucoside-specific iiABC component.
 
    
 0.451
KRL41852.1
Gntr family transcription regulator.
 
   
 0.431
Your Current Organism:
Lactobacillus nagelii
NCBI taxonomy Id: 1122150
Other names: L. nagelii DSM 13675, Lactobacillus nagelii DSM 13675
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.