STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL41349.1Hypothetical protein. (80 aa)    
Predicted Functional Partners:
KRL41431.1
Hypothetical protein.
  
     0.611
KRL40852.1
Hypothetical protein.
  
     0.609
KRL41261.1
Hypothetical protein.
  
     0.588
KRL41347.1
Glutamine-binding protein glutamine transport system permease.
       0.552
KRL41348.1
ABC transporter.
       0.548
KRL41707.1
DoxX family protein.
  
     0.536
KRL40905.1
Integrase recombinase xerD.
  
     0.531
KRL40682.1
Hypothetical protein.
  
     0.526
KRL41998.1
Hypothetical protein.
  
     0.481
KRL42333.1
Hypothetical protein.
  
     0.445
Your Current Organism:
Lactobacillus nagelii
NCBI taxonomy Id: 1122150
Other names: L. nagelii DSM 13675, Lactobacillus nagelii DSM 13675
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.