STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL41371.1Hypothetical protein. (88 aa)    
Predicted Functional Partners:
KRL40852.1
Hypothetical protein.
  
     0.745
KRL40803.1
Hypothetical protein.
  
     0.728
KRL39960.1
Hypothetical protein.
  
     0.701
KRL40385.1
MarR family transcriptional regulator.
  
     0.685
KRL41372.1
Rod shape determining protein; Belongs to the SEDS family.
       0.673
KRL40802.1
Hypothetical protein.
  
     0.669
KRL41431.1
Hypothetical protein.
  
     0.636
KRL41415.1
Rod shape-determining protein MreD.
  
     0.609
KRL39997.1
Phosphotransferase family protein.
  
     0.580
KRL41423.1
Hypothetical protein.
  
     0.580
Your Current Organism:
Lactobacillus nagelii
NCBI taxonomy Id: 1122150
Other names: L. nagelii DSM 13675, Lactobacillus nagelii DSM 13675
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.