STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL41411.1HAD superfamily hydrolase. (217 aa)    
Predicted Functional Partners:
KRL41410.1
Folylpolyglutamate synthase dihydrofolate synthase; Belongs to the folylpolyglutamate synthase family.
  
    0.762
KRL41412.1
DNA repair protein; Belongs to the UPF0758 family.
 
     0.709
valS
valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.
 
     0.636
KRL42225.1
Pyruvate dehydrogenase E1 component beta subunit.
   
  
 0.487
KRL40120.1
PTS system, beta-glucoside-specific IIABC component.
  
  
 0.467
KRL40121.1
PTS system sucrose-specific transporter subunit IIBCA.
  
  
 0.467
KRL40135.1
PTS system beta-glucoside-specific iiABC component.
  
  
 0.467
KRL40136.1
Hypothetical protein.
  
  
 0.467
KRL40137.1
Hypothetical protein.
  
  
 0.467
KRL41683.1
Putative sucrose-specific phosphotransferase system (PTS), IIABC component.
  
  
 0.467
Your Current Organism:
Lactobacillus nagelii
NCBI taxonomy Id: 1122150
Other names: L. nagelii DSM 13675, Lactobacillus nagelii DSM 13675
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.