STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL42463.1Hypothetical protein. (279 aa)    
Predicted Functional Partners:
KRL42093.1
Chemotaxis protein CheA.
 
 
 0.946
KRL42096.1
Chemotaxis signal transduction protein CheW.
 
 
 0.919
KRL42092.1
Protein-glutamate O-methyltransferase.
 
 
 0.876
cheB
Chemotaxis-specific methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 
 0.858
KRL42089.1
Chemotaxis protein CheW.
 
 
 0.846
KRL42098.1
Flagellar motor switch protein.
 
 
 0.774
KRL42235.1
Methyl-accepting chemotaxis sensory transducer.
  
     0.772
cheD
Chemoreceptor glutamine deamidase CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
 
   0.743
KRL42094.1
Chemotaxis protein CheC.
 
 
 0.611
KRL42065.1
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
 
 
 0.599
Your Current Organism:
Lactobacillus nagelii
NCBI taxonomy Id: 1122150
Other names: L. nagelii DSM 13675, Lactobacillus nagelii DSM 13675
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