STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL40505.1Hypothetical protein. (102 aa)    
Predicted Functional Partners:
KRL41847.1
Integral membrane protein.
  
     0.768
KRL41846.1
Branched-chain amino acid transport protein.
  
     0.762
KRL40253.1
Cro CI family transcriptional regulator.
  
     0.704
KRL40656.1
Hypothetical protein.
  
     0.644
KRL41449.1
Hypothetical protein.
  
     0.624
KRL41237.1
IpaB EvcA family protein.
  
     0.556
KRL40802.1
Hypothetical protein.
  
     0.550
KRL41051.1
Hypothetical protein.
  
     0.506
KRL40905.1
Integrase recombinase xerD.
  
     0.499
KRL40269.1
Hypothetical protein.
  
     0.492
Your Current Organism:
Lactobacillus nagelii
NCBI taxonomy Id: 1122150
Other names: L. nagelii DSM 13675, Lactobacillus nagelii DSM 13675
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.