Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KRL40211.1 | KRL40879.1 | FD45_GL002315 | FD45_GL001529 | Homocysteine methyltransferase. | Cystathionine beta-lyase cystathionine gamma-synthase. | 0.925 |
| KRL40211.1 | KRL41310.1 | FD45_GL002315 | FD45_GL000824 | Homocysteine methyltransferase. | Hypothetical protein. | 0.914 |
| KRL40211.1 | KRL41337.1 | FD45_GL002315 | FD45_GL000852 | Homocysteine methyltransferase. | Cystathionine beta-lyase. | 0.925 |
| KRL40211.1 | KRL41338.1 | FD45_GL002315 | FD45_GL000853 | Homocysteine methyltransferase. | Cysteine synthase. | 0.911 |
| KRL40211.1 | KRL41792.1 | FD45_GL002315 | FD45_GL000644 | Homocysteine methyltransferase. | Methionine synthase. | 0.914 |
| KRL40211.1 | KRL42369.1 | FD45_GL002315 | FD45_GL001142 | Homocysteine methyltransferase. | Aminotransferase. | 0.901 |
| KRL40211.1 | KRL42416.1 | FD45_GL002315 | FD45_GL001191 | Homocysteine methyltransferase. | O-acetylhomoserine O-acetylserine sulfhydrylase. | 0.911 |
| KRL40211.1 | luxS | FD45_GL002315 | FD45_GL002023 | Homocysteine methyltransferase. | S-ribosylhomocysteinase; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family. | 0.922 |
| KRL40211.1 | metE | FD45_GL002315 | FD45_GL000919 | Homocysteine methyltransferase. | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. | 0.914 |
| KRL40651.1 | luxS | FD45_GL001292 | FD45_GL002023 | MTA SAH nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily. | S-ribosylhomocysteinase; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family. | 0.982 |
| KRL40879.1 | KRL40211.1 | FD45_GL001529 | FD45_GL002315 | Cystathionine beta-lyase cystathionine gamma-synthase. | Homocysteine methyltransferase. | 0.925 |
| KRL40879.1 | KRL41310.1 | FD45_GL001529 | FD45_GL000824 | Cystathionine beta-lyase cystathionine gamma-synthase. | Hypothetical protein. | 0.947 |
| KRL40879.1 | KRL41337.1 | FD45_GL001529 | FD45_GL000852 | Cystathionine beta-lyase cystathionine gamma-synthase. | Cystathionine beta-lyase. | 0.903 |
| KRL40879.1 | KRL41338.1 | FD45_GL001529 | FD45_GL000853 | Cystathionine beta-lyase cystathionine gamma-synthase. | Cysteine synthase. | 0.932 |
| KRL40879.1 | KRL41792.1 | FD45_GL001529 | FD45_GL000644 | Cystathionine beta-lyase cystathionine gamma-synthase. | Methionine synthase. | 0.947 |
| KRL40879.1 | KRL42369.1 | FD45_GL001529 | FD45_GL001142 | Cystathionine beta-lyase cystathionine gamma-synthase. | Aminotransferase. | 0.945 |
| KRL40879.1 | KRL42416.1 | FD45_GL001529 | FD45_GL001191 | Cystathionine beta-lyase cystathionine gamma-synthase. | O-acetylhomoserine O-acetylserine sulfhydrylase. | 0.931 |
| KRL40879.1 | luxS | FD45_GL001529 | FD45_GL002023 | Cystathionine beta-lyase cystathionine gamma-synthase. | S-ribosylhomocysteinase; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family. | 0.928 |
| KRL40879.1 | metE | FD45_GL001529 | FD45_GL000919 | Cystathionine beta-lyase cystathionine gamma-synthase. | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. | 0.951 |
| KRL41310.1 | KRL40211.1 | FD45_GL000824 | FD45_GL002315 | Hypothetical protein. | Homocysteine methyltransferase. | 0.914 |
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