STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL42309.1Hypothetical protein. (404 aa)    
Predicted Functional Partners:
KRL42310.1
Hypothetical protein.
 
    0.959
KRL42312.1
6-pyruvoyl-tetrahydropterin synthase.
 
    0.922
KRL42311.1
Glycosyltransferase.
 
    0.920
KRL42313.1
Integral membrane protein.
 
     0.909
KRL40311.1
Hypothetical protein.
 
     0.790
KRL40319.1
ABC transporter, permease.
  
     0.694
KRL41051.1
Hypothetical protein.
 
    0.611
KRL40300.1
Transcriptional regulator.
  
     0.486
KRL42146.1
Accessory secretory protein asp1.
  
     0.461
KRL41708.1
Hypothetical protein.
  
    0.458
Your Current Organism:
Lactobacillus nagelii
NCBI taxonomy Id: 1122150
Other names: L. nagelii DSM 13675, Lactobacillus nagelii DSM 13675
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.