STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL40273.1Oligopeptide transport system permease protein. (298 aa)    
Predicted Functional Partners:
KRL40274.1
Oligopeptide transport system permease protein.
 
 0.999
KRL40275.1
Oligopeptide ABC superfamily ATP binding cassette transporter, ABC protein; Belongs to the ABC transporter superfamily.
 0.999
KRL40276.1
Oligopeptide transport ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.998
KRL40271.1
Oligopeptide ABC transporter binding protein.
 
 0.990
KRL41793.1
Oligopeptide ABC superfamily ATP binding cassette transporter, substrate binding protein.
 
 0.987
KRL41819.1
Oligopeptide ABC superfamily ATP binding cassette transporter, binding protein.
 
 0.987
KRL41109.1
Oligopeptide-binding protein.
 
 0.987
KRL40289.1
ABC-type oligopeptide transport system, periplasmic component.
 
 0.986
KRL41318.1
ABC-type dipeptide oligopeptide nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 0.967
KRL41319.1
ABC-type oligopeptide transport system, ATPase component.
  
 0.939
Your Current Organism:
Lactobacillus nagelii
NCBI taxonomy Id: 1122150
Other names: L. nagelii DSM 13675, Lactobacillus nagelii DSM 13675
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.