STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FC23_GL000960Unannotated protein; Belongs to the ABC transporter superfamily. (361 aa)    
Predicted Functional Partners:
FC23_GL000961
Unannotated protein.
 
 0.995
FC23_GL000962
Unannotated protein.
 0.994
FC23_GL000353
Unannotated protein.
  
 0.972
FC23_GL000352
Unannotated protein.
  
 0.967
FC23_GL000351
Unannotated protein.
  
 0.966
FC23_GL001024
Unannotated protein.
  
 0.962
FC23_GL001023
Unannotated protein.
  
 0.962
FC23_GL000473
Unannotated protein.
 
 0.959
FC23_GL001226
Unannotated protein.
 
 0.945
FC23_GL001227
Unannotated protein.
 
 0.944
Your Current Organism:
Lactobacillus psittaci
NCBI taxonomy Id: 1122152
Other names: L. psittaci DSM 15354, Lactobacillus psittaci CIP 106492, Lactobacillus psittaci DSM 15354, Lactobacillus psittaci JCM 11552, Lactobacillus psittaci LMG 21594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.