STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE35337.1Predicted oxidoreductase of the aldo/keto reductase family. (340 aa)    
Predicted Functional Partners:
SHE29241.1
Uncharacterised ACR, YkgG family COG1556.
   
   0.777
SHE35263.1
Phosphopantetheine--protein transferase domain-containing protein; Belongs to the P-Pant transferase superfamily.
       0.773
SHE35285.1
7, 8-dihydropterin-6-yl-methyl-4-(beta-D- ribofuranosyl)aminobenzene 5'-phosphate synthase.
       0.773
SHE35311.1
Metallo-beta-lactamase superfamily protein.
       0.773
SHE30076.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
  0.755
SHE35214.1
Hypothetical protein.
       0.701
SHE35243.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
       0.701
SHF54613.1
Hypothetical protein.
  
     0.652
mscL
Large conductance mechanosensitive channel; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.
       0.497
SHE35355.1
Ornithine cyclodeaminase.
       0.401
Your Current Organism:
Lactonifactor longoviformis
NCBI taxonomy Id: 1122155
Other names: L. longoviformis DSM 17459, Lactonifactor longoviformis DSM 17459
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