STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE36612.12-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. (314 aa)    
Predicted Functional Partners:
SHF54192.1
3-methyl-2-oxobutanoate hydroxymethyltransferase.
 
  
 0.764
SHE80734.1
Cystathione beta-lyase.
   
 
 0.763
SHE36528.1
2-oxoglutarate ferredoxin oxidoreductase subunit gamma.
       0.746
SHE36550.1
2-oxoglutarate ferredoxin oxidoreductase subunit beta.
       0.746
SHE36572.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
       0.746
SHE36591.1
2-oxoglutarate ferredoxin oxidoreductase subunit delta.
       0.746
SHE36135.1
3-methyl-2-oxobutanoate hydroxymethyltransferase.
    
 0.730
SHF03056.1
Dihydroneopterin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
    
 0.618
SHE36650.1
Na+/melibiose symporter.
       0.613
SHE36506.1
Na+/proline symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.610
Your Current Organism:
Lactonifactor longoviformis
NCBI taxonomy Id: 1122155
Other names: L. longoviformis DSM 17459, Lactonifactor longoviformis DSM 17459
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