STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE47823.1Hypothetical protein. (209 aa)    
Predicted Functional Partners:
SHE47799.1
Hypothetical protein.
    
 0.872
SHE74825.1
Hypothetical protein.
 
    0.836
SHE85206.1
Hypothetical protein.
  
 
 0.836
SHE29173.1
Hypothetical protein.
  
 
 0.831
cinA
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
     
 0.817
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
    
 0.806
SHF49162.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
    
 0.801
SHE30076.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
   
 0.789
SHE61621.1
GMP synthase (glutamine-hydrolysing).
     
 0.766
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
     
 0.766
Your Current Organism:
Lactonifactor longoviformis
NCBI taxonomy Id: 1122155
Other names: L. longoviformis DSM 17459, Lactonifactor longoviformis DSM 17459
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.