STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE50472.1Anion transporter. (458 aa)    
Predicted Functional Partners:
SHF22732.1
Di-and tricarboxylate transporter.
  
     0.734
SHE50398.1
4-hydroxy-3-polyprenylbenzoate decarboxylase; Belongs to the UbiD family.
 
   
 0.705
ubiX
4-hydroxy-3-polyprenylbenzoate decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.
 
   
 0.676
SHE50519.1
UbiD family decarboxylase; Belongs to the UbiD family.
 
   
 0.651
SHF59417.1
Hypothetical protein.
  
     0.602
SHE50420.1
Hypothetical protein.
     
 0.568
SHE50500.1
Hypothetical protein.
       0.547
SHF62033.1
Hypothetical protein.
  
     0.487
SHF64940.1
Phage portal protein, SPP1 family.
  
     0.476
SHE58990.1
Transcriptional regulatory protein LevR, contains PRD, AAA+ and EIIA domains.
  
     0.427
Your Current Organism:
Lactonifactor longoviformis
NCBI taxonomy Id: 1122155
Other names: L. longoviformis DSM 17459, Lactonifactor longoviformis DSM 17459
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.