STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE50711.1Nucleoside 2-deoxyribosyltransferase. (373 aa)    
Predicted Functional Partners:
SHE50779.1
Glucosamine--fructose-6-phosphate aminotransferase (isomerizing).
 
     0.891
SHE50834.1
Sugar or nucleoside kinase, ribokinase family.
 
   
 0.866
SHE50855.1
ADP-ribosylglycohydrolase.
 
     0.864
SHE50877.1
ADP-ribosylglycohydrolase.
 
     0.864
SHE50736.1
Pyrimidine-specific ribonucleoside hydrolase.
 
  
 0.856
SHE50946.1
Raffinose/stachyose/melibiose transport system substrate-binding protein.
 
     0.826
SHE50923.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-).
 
     0.786
deoD
Purine-nucleoside phosphorylase.
       0.773
SHE63211.1
Sugar or nucleoside kinase, ribokinase family.
 
   
 0.769
SHE63940.1
Sugar or nucleoside kinase, ribokinase family.
 
   
 0.766
Your Current Organism:
Lactonifactor longoviformis
NCBI taxonomy Id: 1122155
Other names: L. longoviformis DSM 17459, Lactonifactor longoviformis DSM 17459
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