STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE69049.1Stage III sporulation protein AD. (128 aa)    
Predicted Functional Partners:
SHE69016.1
Stage III sporulation protein AE.
 
  
 0.995
SHE68995.1
Stage III sporulation protein AF.
  
  
 0.994
SHE69077.1
Stage III sporulation protein AC.
 
  
 0.993
SHE69100.1
Stage III sporulation protein AB.
 
  
 0.984
SHE69132.1
Stage III sporulation protein AA.
 
  
 0.977
SHE68947.1
Stage III sporulation protein AH.
 
  
 0.942
SHE68964.1
Stage III sporulation protein AG.
 
  
 0.934
SHF29406.1
Stage IV sporulation protein A.
  
    0.919
SHF34841.1
Stage II sporulation protein P.
  
   
 0.822
SHF53396.1
Spore maturation protein A.
  
  
 0.809
Your Current Organism:
Lactonifactor longoviformis
NCBI taxonomy Id: 1122155
Other names: L. longoviformis DSM 17459, Lactonifactor longoviformis DSM 17459
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.