STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE69978.1Protein of unknown function. (159 aa)    
Predicted Functional Partners:
SHE69955.1
PucR C-terminal helix-turn-helix domain-containing protein.
       0.576
SHE30595.1
Hypothetical protein.
  
     0.566
SHF49846.1
FtsX-like permease family protein.
  
     0.433
SHE50352.1
Hypothetical protein.
  
     0.420
SHE69997.1
Protein of unknown function.
       0.407
SHF44041.1
Putative ABC transport system permease protein.
  
     0.406
SHE70017.1
Hypothetical protein.
       0.400
Your Current Organism:
Lactonifactor longoviformis
NCBI taxonomy Id: 1122155
Other names: L. longoviformis DSM 17459, Lactonifactor longoviformis DSM 17459
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.