STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE70384.1Uncharacterized conserved protein, DUF169 family. (273 aa)    
Predicted Functional Partners:
coaE
dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
 
      0.856
SHE70406.1
CoA:oxalate CoA-transferase; Belongs to the CoA-transferase III family.
       0.705
SHE70428.1
methylmalonyl-CoA/ethylmalonyl-CoA epimerase.
       0.700
SHE70449.1
Propionate CoA-transferase; Belongs to the 3-oxoacid CoA-transferase family.
       0.700
SHE70469.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
       0.636
SHE70361.1
C4-dicarboxylate-binding protein DctP.
       0.620
SHE70487.1
3-oxoacyl-[acyl-carrier protein] reductase.
       0.506
SHE70319.1
C4-dicarboxylate transporter, DctM subunit.
       0.494
SHE70344.1
Tripartite ATP-independent transporter, DctQ component.
       0.494
SHF11067.1
Microcystin degradation protein MlrC, contains DUF1485 domain.
  
     0.460
Your Current Organism:
Lactonifactor longoviformis
NCBI taxonomy Id: 1122155
Other names: L. longoviformis DSM 17459, Lactonifactor longoviformis DSM 17459
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