STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF00390.1Urea transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. (368 aa)    
Predicted Functional Partners:
SHF00352.1
Urea transport system substrate-binding protein.
 
 
 0.999
SHF00373.1
Urea transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
SHF00409.1
Urea transport system ATP-binding protein.
 
 0.999
SHF00436.1
Urea transport system ATP-binding protein.
 
 0.999
SHF48377.1
Branched-chain amino acid transport system ATP-binding protein.
 
 0.997
SHF48344.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
0.994
SHF48397.1
Branched-chain amino acid transport system ATP-binding protein.
 
 0.993
SHF48330.1
Branched-chain amino acid transport system substrate-binding protein.
 
 
 0.970
SHF00450.1
Urease subunit gamma/beta; Belongs to the urease gamma subunit family.
 
  
 0.817
SHE35980.1
Cysteine-rich secretory protein family protein.
   
   0.787
Your Current Organism:
Lactonifactor longoviformis
NCBI taxonomy Id: 1122155
Other names: L. longoviformis DSM 17459, Lactonifactor longoviformis DSM 17459
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.