STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF13737.1Subtilase family protein. (580 aa)    
Predicted Functional Partners:
SHF64778.1
The GLUG motif-containing protein.
   
 0.869
SHF17367.1
Serine protease AprX; Belongs to the peptidase S8 family.
 
0.863
SHE34569.1
Putative peptidoglycan-binding domain-containing protein.
  
 0.853
SHE30595.1
Hypothetical protein.
  
 0.817
SHE47799.1
Hypothetical protein.
  
 0.817
SHE58309.1
Protein of unknown function.
  
 0.817
SHE58339.1
Protein of unknown function.
  
 0.817
SHE85587.1
Hypothetical protein.
  
 0.817
SHF00802.1
Putative negative regulator of RcsB-dependent stress response.
  
 0.817
SHF01013.1
Putative cell wall binding repeat-containing protein.
  
 0.817
Your Current Organism:
Lactonifactor longoviformis
NCBI taxonomy Id: 1122155
Other names: L. longoviformis DSM 17459, Lactonifactor longoviformis DSM 17459
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.