STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF14127.1Ribose transport system ATP-binding protein. (512 aa)    
Predicted Functional Partners:
SHF14108.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
 0.920
SHF55548.1
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 0.886
SHF55589.1
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 0.874
SHF55533.1
Ribose transport system substrate-binding protein.
  
 0.839
SHF55633.1
Ribose transport system substrate-binding protein.
  
 0.839
SHF43619.1
Ribose transport system substrate-binding protein.
  
 0.771
SHF43640.1
Ribose transport system substrate-binding protein.
  
 0.771
SHF27610.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
 0.715
SHF14085.1
Kynurenine formamidase.
       0.714
SHF14145.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
  
 0.712
Your Current Organism:
Lactonifactor longoviformis
NCBI taxonomy Id: 1122155
Other names: L. longoviformis DSM 17459, Lactonifactor longoviformis DSM 17459
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.