STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF31516.1Glycosyltransferase involved in cell wall bisynthesis. (552 aa)    
Predicted Functional Partners:
SHF31321.1
Undecaprenyl-phosphate glucose phosphotransferase.
 
 
 0.987
SHF31560.1
Rhamnosyltransferase.
 
 
 0.986
SHF31537.1
Glycosyl transferases group 1.
 
 
 0.984
SHF31654.1
Teichoic acid transport system permease protein.
 
  
 0.978
SHF31605.1
Methyltransferase domain-containing protein.
 0.974
SHF31675.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
 
 0.966
SHF31626.1
Teichoic acid transport system ATP-binding protein.
 
 
 0.965
SHF31284.1
Rhamnosyltransferase.
 
 
 0.904
SHF31382.1
Glycosyltransferase, GT2 family.
 
 
0.902
SHF32033.1
Glycosyl transferase family 2.
 
 
 0.899
Your Current Organism:
Lactonifactor longoviformis
NCBI taxonomy Id: 1122155
Other names: L. longoviformis DSM 17459, Lactonifactor longoviformis DSM 17459
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.