STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF32523.1Hypothetical protein. (349 aa)    
Predicted Functional Partners:
SHF32531.1
Hypothetical protein.
 
     0.954
SHE54641.1
Tetratricopeptide repeat-containing protein.
 
     0.784
SHF40922.1
Hypothetical protein.
 
     0.778
SHE89285.1
Protein of unknown function.
  
     0.775
SHF18706.1
Hypothetical protein.
  
     0.775
SHF45789.1
Type II secretory pathway, pseudopilin PulG.
  
     0.775
SHF49452.1
Hypothetical protein.
  
     0.775
SHE32966.1
Hypothetical protein.
  
     0.774
SHE51321.1
Hypothetical protein.
  
     0.774
SHE51297.1
Hypothetical protein.
  
     0.773
Your Current Organism:
Lactonifactor longoviformis
NCBI taxonomy Id: 1122155
Other names: L. longoviformis DSM 17459, Lactonifactor longoviformis DSM 17459
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.