STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE39421.1Hypothetical protein. (631 aa)    
Predicted Functional Partners:
SHE39466.1
Glycosyltransferase like family 2.
       0.787
SHE39565.1
Hypothetical protein.
       0.621
SHE39619.1
Hypothetical protein.
       0.621
SHE39513.1
Glycosyl transferase family 2.
       0.619
SHE39665.1
UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing); Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
       0.571
SHE39709.1
Hypothetical protein.
       0.571
SHE39368.1
Hypothetical protein.
       0.500
Your Current Organism:
Lampropedia hyalina
NCBI taxonomy Id: 1122156
Other names: L. hyalina DSM 16112, Lampropedia hyalina DSM 16112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.