STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000376945_00486Unannotated protein. (283 aa)    
Predicted Functional Partners:
GCA_000376945_01303
Unannotated protein.
   
  
 0.746
GCA_000376945_00993
Unannotated protein.
   
 
 0.736
GCA_000376945_02006
Unannotated protein.
  
 
 0.697
GCA_000376945_01527
Unannotated protein.
  
  
 0.596
GCA_000376945_01368
Unannotated protein.
  
    0.571
GCA_000376945_01767
Unannotated protein.
  
    0.571
GCA_000376945_01768
Unannotated protein.
  
    0.571
GCA_000376945_00485
Unannotated protein.
       0.559
GCA_000376945_01887
Unannotated protein.
 
     0.559
GCA_000376945_00487
Unannotated protein.
       0.548
Your Current Organism:
Leeia oryzae
NCBI taxonomy Id: 1122158
Other names: L. oryzae DSM 17879, Leeia oryzae DSM 17879
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.