STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000376945_02654Unannotated protein. (363 aa)    
Predicted Functional Partners:
GCA_000376945_00180
Unannotated protein.
 
  
 0.934
GCA_000376945_02377
Unannotated protein.
      0.863
GCA_000376945_00656
Unannotated protein.
 
  
 0.835
GCA_000376945_01467
Unannotated protein.
 
  
 0.827
GCA_000376945_00075
Unannotated protein.
  
  
 0.821
GCA_000376945_01984
Unannotated protein.
  
  
 0.798
GCA_000376945_02605
Unannotated protein.
  
  
 0.796
GCA_000376945_00017
Unannotated protein.
 
 
 0.792
GCA_000376945_00016
Unannotated protein.
 
 
 0.777
GCA_000376945_02960
Unannotated protein.
  
 
 0.754
Your Current Organism:
Leeia oryzae
NCBI taxonomy Id: 1122158
Other names: L. oryzae DSM 17879, Leeia oryzae DSM 17879
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.