Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000701265_02527 | GCA_000701265_02528 | GCA_000701265_02527 | GCA_000701265_02528 | Unannotated protein. | Unannotated protein. | 0.801 |
GCA_000701265_02527 | GCA_000701265_02529 | GCA_000701265_02527 | GCA_000701265_02529 | Unannotated protein. | Unannotated protein. | 0.637 |
GCA_000701265_02527 | GCA_000701265_02530 | GCA_000701265_02527 | GCA_000701265_02530 | Unannotated protein. | Unannotated protein. | 0.828 |
GCA_000701265_02527 | coxB | GCA_000701265_02527 | GCA_000701265_01654 | Unannotated protein. | Unannotated protein; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.425 |
GCA_000701265_02527 | coxC | GCA_000701265_02527 | GCA_000701265_01657 | Unannotated protein. | Unannotated protein. | 0.501 |
GCA_000701265_02527 | ctaB | GCA_000701265_02527 | GCA_000701265_02531 | Unannotated protein. | Unannotated protein; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.684 |
GCA_000701265_02527 | ypmQ | GCA_000701265_02527 | GCA_000701265_02532 | Unannotated protein. | Unannotated protein. | 0.411 |
GCA_000701265_02528 | GCA_000701265_02527 | GCA_000701265_02528 | GCA_000701265_02527 | Unannotated protein. | Unannotated protein. | 0.801 |
GCA_000701265_02528 | GCA_000701265_02529 | GCA_000701265_02528 | GCA_000701265_02529 | Unannotated protein. | Unannotated protein. | 0.979 |
GCA_000701265_02528 | GCA_000701265_02530 | GCA_000701265_02528 | GCA_000701265_02530 | Unannotated protein. | Unannotated protein. | 0.990 |
GCA_000701265_02528 | coxA | GCA_000701265_02528 | GCA_000701265_01655 | Unannotated protein. | Unannotated protein; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.852 |
GCA_000701265_02528 | coxB | GCA_000701265_02528 | GCA_000701265_01654 | Unannotated protein. | Unannotated protein; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.947 |
GCA_000701265_02528 | coxC | GCA_000701265_02528 | GCA_000701265_01657 | Unannotated protein. | Unannotated protein. | 0.833 |
GCA_000701265_02528 | ctaB | GCA_000701265_02528 | GCA_000701265_02531 | Unannotated protein. | Unannotated protein; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.976 |
GCA_000701265_02528 | ctaG | GCA_000701265_02528 | GCA_000701265_01656 | Unannotated protein. | Unannotated protein. | 0.950 |
GCA_000701265_02528 | ypmQ | GCA_000701265_02528 | GCA_000701265_02532 | Unannotated protein. | Unannotated protein. | 0.803 |
GCA_000701265_02529 | GCA_000701265_02527 | GCA_000701265_02529 | GCA_000701265_02527 | Unannotated protein. | Unannotated protein. | 0.637 |
GCA_000701265_02529 | GCA_000701265_02528 | GCA_000701265_02529 | GCA_000701265_02528 | Unannotated protein. | Unannotated protein. | 0.979 |
GCA_000701265_02529 | GCA_000701265_02530 | GCA_000701265_02529 | GCA_000701265_02530 | Unannotated protein. | Unannotated protein. | 0.977 |
GCA_000701265_02529 | coxA | GCA_000701265_02529 | GCA_000701265_01655 | Unannotated protein. | Unannotated protein; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.617 |
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