STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000421845_02639Unannotated protein. (261 aa)    
Predicted Functional Partners:
GCA_000421845_01551
Unannotated protein.
  
     0.774
GCA_000421845_00319
Unannotated protein.
  
     0.773
GCA_000421845_00932
Unannotated protein.
  
     0.773
GCA_000421845_01996
Unannotated protein.
  
     0.768
GCA_000421845_00154
Unannotated protein.
  
     0.756
GCA_000421845_00942
Unannotated protein.
  
     0.753
GCA_000421845_01351
Unannotated protein.
  
     0.749
GCA_000421845_01223
Unannotated protein.
  
     0.746
GCA_000421845_01338
Unannotated protein.
  
     0.743
GCA_000421845_00878
Unannotated protein.
  
     0.742
Your Current Organism:
Leucobacter chironomi
NCBI taxonomy Id: 1122175
Other names: L. chironomi DSM 19883, Leucobacter chironomi DSM 19883
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.