STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EYD73436.1Sensory box/GGDEF family protein. (421 aa)    
Predicted Functional Partners:
EYD72692.1
PAS/PAC sensor hybrid histidine kinase.
  
 0.993
EYD70933.1
Sensory box histidine kinase/response regulator.
 
 0.984
EYD72503.1
Two-component hybrid sensor and regulator.
 
 0.979
EYD70909.1
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domain) with PAS/PAC sensor(s).
 
0.938
EYD70945.1
Pole remodelling regulatory diguanylate cyclase.
0.923
EYD72509.1
Two-component hybrid sensor and regulator.
   
 0.909
EYD73775.1
GAF domain protein; COG2203.
 
 
 0.905
EYD71688.1
Sensory box histidine kinase/response regulator.
 
 0.896
EYD72508.1
Serine phosphatase RsbU, regulator of sigma subunit.
  
 0.891
EYD70998.1
Diguanylate cyclase, putative.
 0.878
Your Current Organism:
Limimaricola hongkongensis
NCBI taxonomy Id: 1122180
Other names: L. hongkongensis DSM 17492, Limimaricola hongkongensis DSM 17492, Loktanella hongkongensis DSM 17492
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.