STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EYD70515.1Hypothetical protein. (121 aa)    
Predicted Functional Partners:
EYD70518.1
Hypothetical protein; FIG00989688.
       0.800
EYD70517.1
Phage major capsid protein.
       0.781
EYD70516.1
Peptidase U35, phage prohead HK97.
       0.779
EYD70514.1
Phage portal protein.
       0.765
Your Current Organism:
Limimaricola hongkongensis
NCBI taxonomy Id: 1122180
Other names: L. hongkongensis DSM 17492, Limimaricola hongkongensis DSM 17492, Loktanella hongkongensis DSM 17492
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.