STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000379825_00176Unannotated protein. (157 aa)    
Predicted Functional Partners:
GCA_000379825_00177
Unannotated protein.
       0.773
GCA_000379825_05073
Unannotated protein.
   
 
 0.677
GCA_000379825_00175
Unannotated protein.
       0.594
GCA_000379825_00178
Unannotated protein.
       0.459
GCA_000379825_04270
Unannotated protein.
   
    0.456
GCA_000379825_00179
Unannotated protein.
 
     0.454
GCA_000379825_01779
Unannotated protein.
  
  
  0.428
GCA_000379825_00432
Unannotated protein.
  
 0.409
GCA_000379825_05570
Unannotated protein.
  
  
  0.402
Your Current Organism:
Longispora albida
NCBI taxonomy Id: 1122182
Other names: L. albida DSM 44784, Longispora albida DSM 44784
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.