STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000422305_01940Unannotated protein. (141 aa)    
Predicted Functional Partners:
GCA_000422305_01942
Unannotated protein.
 
 
  0.912
GCA_000422305_01939
Unannotated protein.
 
     0.856
GCA_000422305_01941
Unannotated protein.
       0.780
GCA_000422305_01937
Unannotated protein.
 
    0.664
GCA_000422305_01800
Unannotated protein.
  
 
  0.633
GCA_000422305_01133
Unannotated protein.
    
  0.630
GCA_000422305_03055
Unannotated protein.
    
  0.630
GCA_000422305_01366
Unannotated protein.
   
  0.576
GCA_000422305_01935
Unannotated protein.
 
    0.535
GCA_000422305_00873
Unannotated protein.
  
   0.527
Your Current Organism:
Luteimonas mephitis
NCBI taxonomy Id: 1122183
Other names: L. mephitis DSM 12574, Luteimonas mephitis DSM 12574
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.