STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI44330.1Hypothetical protein. (167 aa)    
Predicted Functional Partners:
SHI44354.1
Multimeric flavodoxin WrbA.
   
 0.993
SHI67241.1
ABC-type transport system, involved in lipoprotein release, permease component.
  
     0.593
SHI44378.1
Uncharacterised ACR, YkgG family COG1556.
       0.561
SHI41040.1
Kynurenine formamidase.
 
    0.537
SHI43046.1
5'-nucleotidase; Belongs to the 5'-nucleotidase family.
   
  
 0.528
SHI97148.1
Flavorubredoxin.
  
 
  0.480
SHJ42020.1
Flavorubredoxin.
  
 
  0.480
SHJ41071.1
MarR family protein.
  
  
  0.469
SHI46466.1
Acetyltransferase (GNAT) domain-containing protein.
  
     0.462
SHI44129.1
Superoxide dismutase, Cu-Zn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
   
  
 0.456
Your Current Organism:
Lutispora thermophila
NCBI taxonomy Id: 1122184
Other names: Clostridium sp. EBR-02E-0046, L. thermophila DSM 19022, Lutispora thermophila DSM 19022, Lutispora thermophila EBR46
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.